Scientific name | Anguilla dieffenbachii |
Common name | New Zealand longfin eel |
Maximum lifespan | 60.00 years (Anguilla dieffenbachii@AnAge) |
Total mtDNA (size: 16687 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 6840 | 9847 | 4248 | 2592 | 4199 | 5648 |
Base content per 1 kb (bases) | 410 | 590 | 255 | 155 | 252 | 338 |
Base content (%) | 41.0% | 59.0% |
Total protein-coding genes (size: 11447 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 4698 | 6749 | 3060 | 1638 | 2992 | 3757 |
Base content per 1 kb (bases) | 410 | 590 | 267 | 143 | 261 | 328 |
Base content (%) | 41.0% | 59.0% |
D-loop (size: 961 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 293 | 668 | 181 | 112 | 286 | 382 |
Base content per 1 kb (bases) | 305 | 695 | 188 | 117 | 298 | 398 |
Base content (%) | 30.5% | 69.5% |
Total tRNA-coding genes (size: 1562 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 672 | 890 | 378 | 294 | 387 | 503 |
Base content per 1 kb (bases) | 430 | 570 | 242 | 188 | 248 | 322 |
Base content (%) | 43.0% | 57.0% |
Total rRNA-coding genes (size: 2658 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 1152 | 1506 | 617 | 535 | 522 | 984 |
Base content per 1 kb (bases) | 433 | 567 | 232 | 201 | 196 | 370 |
Base content (%) | 43.3% | 56.7% |
12S rRNA gene (size: 947 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 441 | 506 | 240 | 201 | 185 | 321 |
Base content per 1 kb (bases) | 466 | 534 | 253 | 212 | 195 | 339 |
Base content (%) | 46.6% | 53.4% |
16S rRNA gene (size: 1711 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 711 | 1000 | 377 | 334 | 337 | 663 |
Base content per 1 kb (bases) | 416 | 584 | 220 | 195 | 197 | 387 |
Base content (%) | 41.6% | 58.4% |
ATP6 (size: 683 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 271 | 412 | 184 | 87 | 194 | 218 |
Base content per 1 kb (bases) | 397 | 603 | 269 | 127 | 284 | 319 |
Base content (%) | 39.7% | 60.3% |
ATP8 (size: 168 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 70 | 98 | 49 | 21 | 38 | 60 |
Base content per 1 kb (bases) | 417 | 583 | 292 | 125 | 226 | 357 |
Base content (%) | 41.7% | 58.3% |
COX1 (size: 1593 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 685 | 908 | 400 | 285 | 452 | 456 |
Base content per 1 kb (bases) | 430 | 570 | 251 | 179 | 284 | 286 |
Base content (%) | 43.0% | 57.0% |
COX2 (size: 691 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 288 | 403 | 174 | 114 | 176 | 227 |
Base content per 1 kb (bases) | 417 | 583 | 252 | 165 | 255 | 329 |
Base content (%) | 41.7% | 58.3% |
COX3 (size: 785 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 345 | 440 | 215 | 130 | 208 | 232 |
Base content per 1 kb (bases) | 439 | 561 | 274 | 166 | 265 | 296 |
Base content (%) | 43.9% | 56.1% |
CYTB (size: 1140 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 472 | 668 | 314 | 158 | 317 | 351 |
Base content per 1 kb (bases) | 414 | 586 | 275 | 139 | 278 | 308 |
Base content (%) | 41.4% | 58.6% |
ND1 (size: 972 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 399 | 573 | 271 | 128 | 254 | 319 |
Base content per 1 kb (bases) | 410 | 590 | 279 | 132 | 261 | 328 |
Base content (%) | 41.0% | 59.0% |
ND2 (size: 1045 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 407 | 638 | 272 | 135 | 245 | 393 |
Base content per 1 kb (bases) | 389 | 611 | 260 | 129 | 234 | 376 |
Base content (%) | 38.9% | 61.1% |
ND3 (size: 349 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 146 | 203 | 97 | 49 | 106 | 97 |
Base content per 1 kb (bases) | 418 | 582 | 278 | 140 | 304 | 278 |
Base content (%) | 41.8% | 58.2% |
ND4 (size: 1381 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 563 | 818 | 367 | 196 | 364 | 454 |
Base content per 1 kb (bases) | 408 | 592 | 266 | 142 | 264 | 329 |
Base content (%) | 40.8% | 59.2% |
ND4L (size: 297 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 135 | 162 | 92 | 43 | 84 | 78 |
Base content per 1 kb (bases) | 455 | 545 | 310 | 145 | 283 | 263 |
Base content (%) | 45.5% | 54.5% |
ND5 (size: 1842 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 709 | 1133 | 473 | 236 | 487 | 646 |
Base content per 1 kb (bases) | 385 | 615 | 257 | 128 | 264 | 351 |
Base content (%) | 38.5% | 61.5% |
ND6 (size: 522 bases) | GC | AT | G | C | A | T |
---|---|---|---|---|---|---|
Base content (bases) | 213 | 309 | 155 | 58 | 73 | 236 |
Base content per 1 kb (bases) | 408 | 592 | 297 | 111 | 140 | 452 |
Base content (%) | 40.8% | 59.2% |
ATP6 (size: 683 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
8 | 9 | 9 | 6 | 5 | 25 | 5 | 10 | 9 | 0 | 2 | 3 | 11 | 1 | 7 | 5 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
3 | 0 | 0 | 3 | 4 | 9 | 0 | 2 | 1 | 7 | 0 | 4 | 1 | 10 | 1 | 4 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
4 | 14 | 1 | 2 | 2 | 0 | 0 | 1 | 5 | 3 | 2 | 0 | 1 | 1 | 7 | 2 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
1 | 4 | 0 | 0 | 1 | 1 | 0 | 1 | 0 | 5 | 0 | 0 | 0 | 0 | 0 | 5 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
48 | 75 | 67 | 37 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
27 | 59 | 31 | 110 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
12 | 50 | 119 | 46 |
ATP8 (size: 168 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: MPQLNPAPWFTILVFSWAVFLAILPTKVMAHTFNNEPNQQTAKKPKLDSWNWPWY* | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
0 | 2 | 1 | 1 | 0 | 2 | 0 | 2 | 2 | 1 | 0 | 0 | 2 | 1 | 1 | 3 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
1 | 0 | 0 | 1 | 2 | 2 | 0 | 0 | 0 | 0 | 0 | 0 | 3 | 4 | 0 | 1 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
1 | 1 | 1 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 2 | 3 | 0 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
1 | 0 | 1 | 0 | 1 | 4 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 4 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
10 | 14 | 17 | 15 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
5 | 18 | 17 | 16 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
6 | 17 | 26 | 7 |
COX1 (size: 1593 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
21 | 18 | 15 | 11 | 5 | 29 | 6 | 11 | 9 | 0 | 8 | 7 | 26 | 3 | 19 | 22 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
8 | 1 | 0 | 10 | 19 | 14 | 2 | 7 | 10 | 23 | 8 | 7 | 3 | 19 | 1 | 5 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
14 | 19 | 1 | 5 | 5 | 11 | 2 | 2 | 2 | 11 | 8 | 0 | 0 | 7 | 8 | 8 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
12 | 12 | 2 | 5 | 11 | 10 | 1 | 3 | 0 | 4 | 2 | 0 | 1 | 0 | 0 | 18 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
167 | 119 | 132 | 113 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
81 | 137 | 104 | 209 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
37 | 144 | 220 | 130 |
COX2 (size: 691 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
8 | 9 | 11 | 5 | 2 | 11 | 2 | 7 | 8 | 1 | 3 | 5 | 11 | 2 | 3 | 6 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
2 | 0 | 2 | 0 | 5 | 13 | 1 | 1 | 1 | 6 | 1 | 2 | 3 | 8 | 1 | 4 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
1 | 5 | 0 | 2 | 2 | 6 | 1 | 0 | 3 | 6 | 3 | 0 | 0 | 2 | 4 | 6 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
4 | 13 | 1 | 3 | 10 | 3 | 0 | 0 | 1 | 4 | 1 | 0 | 0 | 0 | 0 | 5 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
76 | 59 | 52 | 43 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
25 | 54 | 64 | 87 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
13 | 61 | 111 | 45 |
COX3 (size: 785 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
9 | 6 | 8 | 2 | 4 | 17 | 2 | 5 | 8 | 1 | 4 | 4 | 7 | 3 | 8 | 15 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
1 | 2 | 0 | 1 | 12 | 7 | 0 | 2 | 6 | 11 | 2 | 1 | 2 | 9 | 0 | 4 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
8 | 14 | 0 | 1 | 1 | 6 | 2 | 0 | 3 | 7 | 5 | 2 | 0 | 0 | 1 | 5 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
10 | 10 | 0 | 2 | 3 | 3 | 0 | 0 | 1 | 4 | 0 | 0 | 0 | 0 | 0 | 10 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
74 | 66 | 57 | 64 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
43 | 68 | 55 | 95 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
13 | 81 | 119 | 48 |
CYTB (size: 1140 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
14 | 11 | 12 | 12 | 6 | 32 | 2 | 8 | 6 | 0 | 4 | 4 | 20 | 2 | 8 | 20 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
1 | 0 | 3 | 5 | 13 | 9 | 0 | 1 | 6 | 18 | 1 | 2 | 0 | 20 | 0 | 1 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
9 | 10 | 0 | 4 | 5 | 15 | 0 | 0 | 1 | 4 | 12 | 1 | 0 | 3 | 17 | 5 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
7 | 5 | 0 | 4 | 7 | 8 | 1 | 1 | 0 | 7 | 0 | 0 | 0 | 1 | 0 | 12 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
99 | 100 | 88 | 93 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
51 | 93 | 80 | 156 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
8 | 121 | 183 | 68 |
ND1 (size: 972 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
16 | 8 | 13 | 10 | 6 | 31 | 1 | 10 | 5 | 0 | 2 | 2 | 12 | 0 | 7 | 9 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
3 | 0 | 0 | 4 | 18 | 12 | 0 | 2 | 4 | 10 | 2 | 2 | 4 | 18 | 0 | 2 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
7 | 13 | 0 | 0 | 3 | 13 | 0 | 0 | 2 | 7 | 5 | 0 | 2 | 3 | 13 | 1 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
2 | 12 | 0 | 0 | 3 | 8 | 0 | 1 | 1 | 5 | 1 | 0 | 0 | 1 | 0 | 8 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
83 | 88 | 88 | 65 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
36 | 96 | 60 | 132 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
9 | 87 | 171 | 57 |
ND2 (size: 1045 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
15 | 12 | 25 | 5 | 6 | 29 | 3 | 11 | 12 | 2 | 0 | 1 | 8 | 0 | 2 | 7 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
12 | 1 | 0 | 6 | 12 | 14 | 1 | 1 | 3 | 13 | 2 | 1 | 3 | 15 | 1 | 3 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
10 | 30 | 1 | 2 | 1 | 10 | 1 | 1 | 2 | 4 | 4 | 0 | 3 | 5 | 5 | 2 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
5 | 4 | 2 | 0 | 2 | 13 | 0 | 0 | 0 | 4 | 0 | 0 | 0 | 0 | 0 | 11 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
69 | 88 | 134 | 57 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
38 | 111 | 60 | 139 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
28 | 73 | 199 | 48 |
ND3 (size: 1045 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
15 | 12 | 25 | 5 | 6 | 29 | 3 | 11 | 12 | 2 | 0 | 1 | 8 | 0 | 2 | 7 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
12 | 1 | 0 | 6 | 12 | 14 | 1 | 1 | 3 | 13 | 2 | 1 | 3 | 15 | 1 | 3 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
10 | 30 | 1 | 2 | 1 | 10 | 1 | 1 | 2 | 4 | 4 | 0 | 3 | 5 | 5 | 2 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
5 | 4 | 2 | 0 | 2 | 13 | 0 | 0 | 0 | 4 | 0 | 0 | 0 | 0 | 0 | 11 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
69 | 88 | 134 | 57 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
38 | 111 | 60 | 139 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
28 | 73 | 199 | 48 |
ND4 (size: 1381 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
26 | 17 | 24 | 6 | 12 | 44 | 4 | 18 | 11 | 0 | 1 | 2 | 13 | 1 | 6 | 8 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
5 | 1 | 4 | 3 | 14 | 15 | 2 | 2 | 7 | 14 | 6 | 1 | 6 | 17 | 0 | 6 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
14 | 18 | 1 | 4 | 8 | 11 | 1 | 0 | 5 | 7 | 8 | 2 | 2 | 4 | 9 | 6 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
4 | 11 | 1 | 2 | 3 | 11 | 2 | 1 | 2 | 8 | 1 | 0 | 0 | 0 | 0 | 18 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
97 | 123 | 142 | 98 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
71 | 121 | 79 | 189 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
28 | 123 | 233 | 76 |
ND4L (size: 297 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
1 | 0 | 5 | 2 | 2 | 9 | 2 | 4 | 2 | 0 | 0 | 0 | 3 | 0 | 3 | 5 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
2 | 2 | 1 | 2 | 7 | 4 | 0 | 1 | 2 | 0 | 1 | 0 | 1 | 1 | 0 | 1 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
4 | 3 | 0 | 1 | 4 | 4 | 0 | 1 | 1 | 0 | 1 | 0 | 1 | 1 | 1 | 1 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
4 | 2 | 1 | 0 | 1 | 1 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 1 | 0 | 1 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
24 | 26 | 21 | 28 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
12 | 32 | 16 | 39 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
7 | 34 | 41 | 17 |
ND5 (size: 1842 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
28 | 25 | 30 | 11 | 10 | 43 | 4 | 17 | 21 | 1 | 11 | 3 | 15 | 1 | 17 | 24 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
8 | 5 | 1 | 10 | 19 | 21 | 1 | 3 | 7 | 19 | 2 | 3 | 3 | 24 | 0 | 8 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
12 | 34 | 2 | 4 | 4 | 15 | 1 | 0 | 11 | 3 | 10 | 3 | 1 | 9 | 25 | 5 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
8 | 11 | 1 | 5 | 8 | 25 | 1 | 0 | 0 | 7 | 2 | 0 | 0 | 1 | 0 | 11 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
137 | 142 | 218 | 117 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
71 | 161 | 134 | 248 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
28 | 170 | 294 | 122 |
ND6 (size: 522 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
9 | 1 | 2 | 7 | 0 | 0 | 1 | 7 | 0 | 0 | 10 | 0 | 5 | 4 | 15 | 0 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
2 | 5 | 0 | 10 | 2 | 4 | 0 | 6 | 4 | 3 | 12 | 2 | 0 | 0 | 2 | 1 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
1 | 0 | 0 | 5 | 0 | 2 | 1 | 3 | 0 | 12 | 1 | 2 | 13 | 1 | 0 | 0 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
0 | 2 | 3 | 4 | 1 | 0 | 0 | 4 | 0 | 1 | 1 | 0 | 0 | 0 | 1 | 2 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
70 | 18 | 20 | 66 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
43 | 30 | 25 | 76 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
42 | 10 | 28 | 94 |
Total protein-coding genes (size: 11468 bases) | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Amino acid sequence: | |||||||||||||||
Amino acid frequencies: |
|||||||||||||||
Codon statistics: | |||||||||||||||
AUU | AUC | AUA | CUU | CUC | CUA | CUG | UUA | CAA | CAG | GUU | GUC | GUA | GUG | UUU | UUC |
163 | 121 | 158 | 83 | 61 | 283 | 35 | 110 | 96 | 6 | 45 | 33 | 135 | 19 | 100 | 129 |
AUG | UGU | UGC | GCU | GCC | GCA | GCG | GGU | GGC | GGA | GGG | CCU | CCC | CCA | CCG | ACU |
49 | 17 | 13 | 57 | 128 | 126 | 7 | 29 | 51 | 129 | 37 | 27 | 31 | 149 | 7 | 42 |
ACC | ACA | ACG | UCU | UCC | UCA | UCG | AGU | AGC | UAU | UAC | UGG | UUG | AAU | AAC | CAU |
87 | 164 | 8 | 31 | 38 | 99 | 9 | 8 | 35 | 65 | 61 | 11 | 23 | 39 | 94 | 41 |
CAC | GAA | GAG | GAU | GAC | AAA | AAG | CGU | CGC | CGA | CGG | AGA | AGG | UAA | UAG | UGA |
59 | 92 | 12 | 27 | 54 | 88 | 5 | 12 | 6 | 51 | 8 | 0 | 1 | 5 | 1 | 110 |
Codons with 1st base G | Codons with 1st base C | Codons with 1st base A | Codons with 1st base U | ||||||||||||
981 | 955 | 1062 | 822 | ||||||||||||
Codons with 2nd base G | Codons with 2nd base C | Codons with 2nd base A | Codons with 2nd base U | ||||||||||||
518 | 1010 | 745 | 1547 | ||||||||||||
Codons with 3rd base G | Codons with 3rd base C | Codons with 3rd base A | Codons with 3rd base U | ||||||||||||
238 | 1001 | 1795 | 786 |